The theft light is on in my 1998 lincoln navigator and I've done the autolock procedure exactly how y'all say to& my horn is honking like it should but still it will not start and the theft light still continues to flash and the truck still doesn't start up. What can I do??

30 minute reset turn key on ten minutes security light will go off turn off back on three times it ctanks

Your vehicle has two theft systems - content theft , if the door is opened without the key or keyless entry key fob the horn honks lights flash . PATS - passive anti-theft system ,this keeps the vehicle from starting if the computers don't see the right code from the transponder pellet in the head of the key .
You can turn off the content theft but not the PATS , when trying to start the vehicle does the theft light flash fast ? Red light on top of the dash .

are you using a copy of the original key

you need to use the original key for the car

Antitheft and Alarm Systems: Description and Operation
ANTI-THEFT
The passive anti-theft system (PATS) uses radio frequency identification technology
to deter a driveaway theft. Passive means that it does not require any activity from
the user.
The PATS uses a specially encoded ignition key. Each encoded ignition key contains a
permanently installed electronic device called a transponder. Each transponder
contains a unique electronic identification code, with over 72 million billion
combinations.
Each encoded ignition key must be programmed into the vehicle powertrain control
module (PCM) before it can be used to start the engine. There are special diagnostic
procedures that must be carried out if new encoded ignition keys are to be
configured.
The encoded key is larger than a traditional ignition key. The key does not require
batteries and should last the life of the vehicle.
The transceiver module communicates with the encoded ignition key. This module is
located behind the steering column shroud and contains an antenna connected to a
small electronic module. During each vehicle start sequence, the transceiver module
reads the encoded ignition key identification code and sends the data to the PCM.
The control functions are contained in the PCM. This module carries out all of the
PATS functions such as receiving the identification code from the encoded ignition
key and controlling engine enable. The PCM initiates the key interrogation sequence
when the vehicle ignition switch is turned to ON or START.
The PATS function uses the PCM to enable or disable the engine. All elements of PATS
must be functional before the engine is allowed to start. If any of the components
are not working correctly, the vehicle will not start.
PATS uses a visual theft indicator located on top of the instrument panel. This
indicator will prove out for three seconds when the ignition switch is turned to ON
or START under normal operation. If there is a PATS problem, this indicator will
either flash rapidly or glow steadily (for more than three seconds) when the ignition
switch is turned to ON or START. PATS also "flashes" the theft indicator every two
seconds at ignition OFF to act as a visual theft deterrent.
The PATS is not compatible with aftermarket remote start systems, which allow the
vehicle to be started from outside the vehicle. These systems may reduce the vehicle
security level, and also may cause no-start issues. Remote start systems must be
removed before investigation of PATS-related no-start issues.

The PATs key is used on the following Ford family trucks and suvs:

FORD: 1996-2001 MUSTANG, TAURUS
1998-2000 CONTOUR
1998-2001 CROWN VICTORIA
2000-2001 FOCUS
2002 THUNDERBIRD
1997-2001 EXPEDITION
1998-2002 EXPLORER
1999 F-250 LD
1999-2001 F-150, RANGER, WINDSTAR
2000-2001 EXCURSION
2001 ESCAPE
LINCOLN: 1997-1998 MARK VIII
1998-2001 CONTINENTAL, TOWN CAR
2000-2001 LS
1998-2001 NAVIGATOR
2002 BLACKWOOD
MERCURY: 1996-2001 SABLE
1998-2000 MYSTIQUE
1998-2001 GRAND MARQUIS
1999-2001 COUGAR
1998-2002 MOUNTAINEER

Additionally, PATs can be found on the follow Ford family cars and mini-vans:

1998-up Contour
1997-up Crown Victoria
1999-up Escort
2000-up Focus
1996-up Mustang and Taurus
1998-up Windstar
1998-up 2000-up Lincoln LS
1998-up Lincoln Mark VIII, Lincoln Continental and Lincoln Town Car
1997-up Mercury Grand Marquis
1998-up Mercury Mystique
1996-up Mercury Sable

Following are the instructions for programming a blank key (you must have at least one working key for this procedure).

The PAT

1. Make sure you have both keys.
2. Turn on car but don't start. Watch "theft" indicator untils it goes out.
3. Turn off and repeat procedure with second key.
4. After "theft light goes out, insert new key and turn on.
5. Wait until the theft indicator goes off and then turn off switch.
6. Wait thirty seconds. New key is now programmed into security module. Repeat for any other keys.


1. Erase any old codes by entering the factory code.(buttons will light up)
2. Press 1/2 button within 5 seconds.
3. Press 7/8 and 9/0 buttons at the same time within 5 seconds.

To set new code:

1. Enter factory code (numbers will light up)
2. Press 1/2 button within 5 seconds.
3. Enter personal 5 digit code(decide beforehand) within 5 seconds of each previous one.
To unlock all the doors,press the 3/4 button within 5 seconds of the driver door unlocking.
To lock all doors and set alarm system,press 7/8 and 9/0 at the same time.
To disarm or reset a triggered alarm,just enter personal or factory code.

Do not set a code with five of the same consecutive numbers. It's too easy for thieves to figure out.

Deactivating and Activating Autolock

To deactivate the "autolock":
With all doors and tailgate closed but NOT locked,and ignition OFF.
1. Enter 5 digit code
2. While holding 7/8 button in, press and release the 3/4 button.
3. Release 7/8 button
The horn will chirp once if the "autolock" was deactivated
or two times if "autolock" was activated.

To reactivate the system,repeat steps 1 thru 3

Alternate Method To Deactivate And Activate Autolock

Do steps [1] through [5] (below) within 30 seconds or you'll have to do it over. If you have to do it over, wait 30 seconds between attempts.
Close all doors securely.

1.Turn the ignition key to ON.

2.Press the power door UNLOCK control THREE times.

3.Turn the ignition key from ON to OFF.

4.Press the power door UNLOCK control THREE times.

5.Turn the ignition key back to ON .The doors should lock and unlock.

6.Press the power door UNLOCK control. The horn should chirp ONCE to confirm successful switching of the autolock system

Troubleshooting:

The engine does not start and LED remains off.
1. Check PATS system fuses
2. If alarm is fitted check if LED functions for alarm: if not check cigar lighter fuse (also used for LED)
3. If not go to main dealer

Engine does not start: LED flashes rapidly Leave ignition on until the LED starts to flash a 2 digit code: (sequence- pause-sequence)
Check the following codes:
Code flashes:
1:3 Key code not received. Is key screened by other keys or objects? Try different key: if okay then first key is faulty. If not go to main dealer
1:4 Partial code only received. Try again. If not okay use different key. If not go to main dealer
1:5 Key not programmed into PATS. Program key as above using master
1:6 Faulty link between PATS module and EECV Go to dealer .

Deactivating/activating the autolock feature...
Before following the procedure, make sure that the ignition is OFF and all vehicle doors and the liftgate window are closed.
You must complete steps 1-5 within 30 seconds or the procedure will have to be repeated. If the procedure needs to be repeated, you must wait 30 seconds.
1. Turn the ignition key to ON.
2. Press the power door unlock control three times.
3. Turn the ignition key from ON to OFF.
4. Press the power door unlock control three times.
5. Turn the ignition back to ON. The horn will chirp.
6. Press the unlock control, then press the lock control. The horn will
chirp once if autolock was deactivated or twice (one short and one long
chirp) if autolock was activated.
7. Turn the ignition to OFF. The horn will chirp once to confirm the
procedure is complete.

Also, if your vehicle is equipped with a coded-key anti-theft system. Only the correct key will be able to start your vehicle. If your keys are lost or stolen, you must take your vehicle to a Ford/Lincoln-Mercury dealership for re-programming.
Programming additional keys If you need additional keys electronically coded for your vehicle, spares can be purchased (a maximum of 16 keys can be programmed). To program a new key, perform the following procedure:
1. With the coded key in the ignition, turn the ignition from ON to OFF.
2. Within 15 seconds of turning ignition off, insert the new coded key
into the ignition and turn it from OFF to ON or START. If successful, the
THEFT indicator light will illuminate for two seconds. Repeat procedure
for all new keys.
If key coding fails, the THEFT indicator light will flash.
Coding failure can be caused by any of the following:
² The new key was not inserted into the ignition within 15 seconds.
² 16 keys have already been programmed.
² The new key does not have an electronic code.

Other details can find in the 1998-Lincoln-Navigator-Owners-Manual

Good luck (remember comment and rated this).

Many Ford trucks, vans and suvs use PATs (passive anti-theft) keys. These keys prevent someone from copying your key to a blank and using the blank. There is a small chip in the key which the vehicle must recognize before it will start.
PATS is Ford Motor Company's passive anti theft system. In 1996 it started showing up on select models of Ford and Lincoln Mercury vehicles. The keys for these vehicles have a tiny radio frequency transponder imbedded in the plastic Head.
When you attempt to start the vehicle, the onboard computer sends out a RF signal that is picked up by the transponder in the key. The transponder then returns a unique RF signal to the vehicle's computer, giving it the ok for the vehicle to start and continue to run. This all happens in less than a second, and is completely transparent to the vehicle operator. It is a very effective system that does its job without the vehicle owner having to think about it, or modify his / her usual routine.
The PATs key is used on the following Ford family trucks and SUVS:
1998-up F-150
1998-up Expedition
2000-up Excursion
1998-up Explorer
1998-up Ranger
1998-up Lincoln Navigator
1998-up Mercury Mountaineer


Additionally, PATs can be found on the follow Ford family cars and mini-vans:
1998-up Contour
1997-up Crown Victoria
1999-up Escort
2000-up Focus
1996-up Mustang and Taurus
1998-up Windstar
1998-up 2000-up Lincoln LS
1998-up Lincoln Mark VIII, Lincoln Continental and Lincoln Town Car
1997-up Mercury Grand Marquis
1998-up Mercury Mystique
1996-up Mercury Sable
Following are the instructions for programming a blank key (you must have at least one working key for this procedure).
The PAT
1. Make sure you have both keys.
2. Turn on car but don't start. Watch "theft" indicator untils it goes out.
3. Turn off and repeat procedure with second key.
4. After "theft light goes out, insert new key and turn on.
5. Wait until the theft indicator goes off and then turn off switch.
6. Wait thirty seconds. New key is now programmed into security module. Repeat for any other keys.


1. Erase any old codes by entering the factory code.(buttons will light up)
2. Press 1/2 button within 5 seconds.
3. Press 7/8 and 9/0 buttons at the same time within 5 seconds.

To set new code:

1. Enter factory code (numbers will light up)
2. Press 1/2 button within 5 seconds.
3. Enter personal 5 digit code(decide beforehand) within 5 seconds of each previous one.
To unlock all the doors,press the 3/4 button within 5 seconds of the driver door unlocking.
To lock all doors and set alarm system,press 7/8 and 9/0 at the same time.
To disarm or reset a triggered alarm,just enter personal or factory code.

Do not set a code with five of the same consecutive numbers. It's too easy for thieves to figure out.

Deactivating and Activating Autolock

To deactivate the "autolock":
With all doors and tailgate closed but NOT locked,and ignition OFF.
1. Enter 5 digit code
2. While holding 7/8 button in, press and release the 3/4 button.
3. Release 7/8 button
The horn will chirp once if the "autolock" was deactivated
or two times if "autolock" was activated.

To reactivate the system,repeat steps 1 thru 3

Alternate Method To Deactivate And Activate Autolock

Do steps [1] through [5] (below) within 30 seconds or you'll have to do it over. If you have to do it over, wait 30 seconds between attempts.
Close all doors securely.

1.Turn the ignition key to ON.

2.Press the power door UNLOCK control THREE times.

3.Turn the ignition key from ON to OFF.

4.Press the power door UNLOCK control THREE times.

5.Turn the ignition key back to ON .The doors should lock and unlock.

6.Press the power door UNLOCK control. The horn should chirp ONCE to confirm successful switching of the autolock system.


Hope this help you (remember comment and rates this).

here is the instructions,i had to type it out because the picture was too large.Its actually for my 2000 Ford,give it a try because it might work.

Deactivating/activating the autolock feature
Before following the procedure,make sure that the ignition is OFF and all vehicle doors are closed.You must complete steps 1-7 within 30 seconds or the procedure will have to be repeated.If the procedure needs to be repeated,you must wait 30 seconds.
1.Turn the ignition key to ON.
2.Press the power door UNLOCK control three times.
3.Turn the ignition key form ON to OFF.
4.Press the power door UNLOCK control three times.
5.Turn the ignition back to ON,The horn will chirp.
6.Press the UNLOCK control,then press the lock control.The horn will chirp once if autolock was deactivated or twice(one short and one long chirp)if autolock was activated.
7.Turn the ignition to OFF.The horn will chirp once to confirm the procedure is complete...Page 89 of the owners manual
about the Town car,try it on there as well,it wouldnt hurt it,i just dont have the manual for it.

check your car manuel and it should tell you to solve both

Deactivating/activating autolock
There are 3 methods to enable/disable this feature. One through your
dealer, the second with a power door unlock/lock sequence and the third
with the keypad.
Before following the activation or deactivation procedures, make sure
that the anti-theft system is not armed, ignition is off, and all vehicle
doors, liftgate and liftgate window are closed.
Controls and features
Power door unlock/lock
procedure
You must complete steps 1-5 within
30 seconds or the procedure will
have to be repeated. If the
procedure needs to be repeated,
you must wait 30 seconds.
1. Turn the ignition key to ON.
2. Press the power door unlock control three times.
3. Turn the ignition key from ON to OFF.
4. Press the power door unlock control three times.
5. Turn the ignition back to ON. The horn will chirp.
6. Press the unlock control, then press the lock control. The horn will
chirp once if autolock was deactivated or twice (one short and one long
chirp) if autolock was activated.
7. Turn the ignition to OFF. The horn will chirp once to confirm the
procedure is complete.
Keyless entry key pad procedure
1. Enter 5 digit entry code
2. Press and hold 7/8 control
3. Press and release 3/4 control
4. Release 7/8 control.
The user should receive a horn
chirp to indicate the system has
been disabled or a chirp followed by
a honk to indicate the system has
been enabled.
Smart unlock
This feature prevents the driver’s door from locking while the key is in
the ignition. This feature will unlock only the driver’s door if the key is in
the ignition cylinder, the driver’s door is ajar and all doors are locked
using the interior trim switch. If these conditions are met, the entire
vehicle will lock and the driver’s door will unlock within 1 second.
Controls and features
127

Try disconnecting the battery for 5 minutes. then when you reconnect the battery lock and unlock the drivers door with the key, door closed. this will on some models deactivate the anti theft system. but it must be done with the hood closed and all the doors closed and from outside with the key. mike

Coil Pack or coil packs are bad there is 1 for each spark plug