Programming forester key after battery replacement

Changed battery now running lights flash 2000 Forester Quick fix on mine use remote key fob lock door then unlock everything good no more flashing.

call lock smith one that works on cars they have special programers avarage cost 100-125

Wrong remote or wrong programming method or system is not operable.

You have a dead battery.
The procedure to fix it is as follows:
1) Charge battery.
2) check alternator belt tension. If loose, tighten or replace.
3) If still no start, replace battery.

Bad battery (have the battery tested) Bad connection, corrosion on the terminal and in the cable, replace the cable, recharge the battery to full charge.

1. If you have the remote, check if that might have been immersed in water- have that changed.
2. The receiver in the car might be defective- have that checked.

Here's a link to program your fobs,need to do both at the same time. 2008 Subaru Forester Key Fob Remote Programming Instructions

Obtain all keys/remote controls. Remove driver's side kick panel/lower 'A' pillar trim. Connect central locking registration connectors (white) - black wire and black/blue wire Fig. 2 . Unlock the vehicle using the key. Program first key/remote control as follows: Press unlock button Fig. 1 [1], then lock button [2]. The door lock should lock and unlock in sequence confirming programming of first key/remote control. Repeat programming procedure for remaining key(s)/remote control(s). Once the last key/remote control is programmed disconnect central locking registration connectors. Check operation of all programmed keys/remote controls.

IMPREZA: 2005, 2006, 2007 and
FORESTER: 2005, 2006, 2007, 2008
Check for Immobilizer key on Forester XT models only.
information is always subject to change and correction
new remote for 2005 Imprezas.
This is not the same remote as the 05 Legacy/Outback remote which also has truck/gate release on the front and a red panic button on the back.
Lock: press Lock button for 2 seconds or so to lock car, and arm optional security system. The car with chirp once and turn signals flash for locked, 5 short chirps and signal flashes if any door is not fully closed. The dome light goes on for 15 seconds and ignition key ring (if present) will light for 30 seconds when unlocked.
Unlock: press unlock one time for driver's door, press again within 5 seconds to unlock all doors inkling rear gate (wagon). The system does not open the trunk.
Panic mode: press and hold lock button for approx. 3-4 seconds to activate Panic mode. I panic model the horn honks and turn signals flash until either the lock or unlock button is pushed again.
Finder mode: Press lock button 3 times within 5 seconds to activate Vehicle Finder mode. The horn will honk once and the turn signals will flash 3 times
Distance: works within approx. 30 feet depending on battery strength, nearby concrete walls and etc.
Audible Chirp On-Off: the system will chirp when locked or unlocked. To turn OFF the chirps, unlock the door and then push both lock and unlock buttons at the exact same time for 2+ seconds. There will be 2 chirps indicating the the audible is off. To turn the chirp back on, repeat the process and the system will chirp one time when it is back on.
Battery: as the battery ages it will only work as you get closer to the car. When a battery is replaced, the transmitter must be re-synchronized with the Keyless control unit. To synchronize, press the lock or unlock button 6 times.
Programming: 4 codes may be programmed.
Sit in driver's seat and unlock all doors. Open and close the driver's door
Turn the ignition key from LOCK to ON position 10 times within 15 seconds. Be sure to stop at both lock and on. The horn will HONK once to indicate transmitter programming mode is activated. Leave key in LOCK position and don't remove it from ignition.
You now have 45 seconds to complete the programming as below.
Open and close driver's door again.
Push either lock or unlock button on the remote you want to program. The horn will honk 2 times when successful.
To continue and program other remotes at the same time: open and close the driver's door and push lock or unlock on the remote. The driver's door must be opened and closed between each remote you want to program.
Done programming? remove the key from the ignition and the horn will honk 3 times.
DELETE old codes? Reprogram 4 times, it will overwrite old codes.
Alarm Security System: optional on all models. When locked there is one chirp (can be turned off, see above), the turn signals will flash and the red 'security' light will start to flash once every 2 seconds except for STi which flashes twice every 2 seconds.
There will be 5 chirps if a door, hood, and trunk or gate is not fully closed
You can also arm the system by using the power lock button on the driver or passenger door as you get out of the car and then closing the door behind you.
Disarm the system: push unlock for 2 seconds
Lost remote, alarm activated? When you can't use a remote to turn off the system: open the door with a key or try to start the car and the horn will start to honk. Turn the key on-off 3 times within 5 seconds and the alarm will go off and you can start the car. It's simple!
VALET mode: To set valet mode or just to disable the security alarm system: 1. unlock all doors 2. physically open the driver's door 3. hold the UNLOCK button on remote for 2+ seconds. The red 'security' light will then flash 2 times a second until the car is turned on.
System has been Tripped (except for STi): if you unlock the door with the remote and it chirps the signal light flash 4 times, the system has been triggered;
Identification mode: To find out what happened and why the system was triggered:
Open and drivers door, leave it open. Turn ignition key from LOCK to ON 2 times and then leave in LOCK position.
Tripped code: 1 security light flash: a door has been opened, 3 flashes when the impact sensor was triggered, 4 flashes when the ignition was messed with or battery disconnected